HL_8BRM_058

3D structure

PDB id

8BRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state, no E-site tRNA (A6)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

CUACACCGGACCG

Length

13 nucleotides

Bulged bases

8BRM|1|Lt|A|2061, 8BRM|1|Lt|C|2068

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BRM|1|Lt|C|2057
8BRM|1|Lt|U|2058
8BRM|1|Lt|A|2059
8BRM|1|Lt|C|2060
8BRM|1|Lt|A|2061
8BRM|1|Lt|C|2062
8BRM|1|Lt|C|2063
8BRM|1|Lt|G|2064
8BRM|1|Lt|G|2065
8BRM|1|Lt|A|2066
8BRM|1|Lt|C|2067
8BRM|1|Lt|C|2068
8BRM|1|Lt|G|2069

Current chains

Chain Lt

Large Subunit rRNA

Nearby chains

Chain LU

Ribosomal protein L21

Chain Lc

Ribosomal protein L29