HL_8BRM_087

3D structure

PDB id

8BRM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Giardia ribosome in POST-T state, no E-site tRNA (A6)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

CGCGGCGCGCCG

Length

12 nucleotides

Bulged bases

8BRM|1|St|G|595, 8BRM|1|St|C|596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BRM|1|St|C|591
8BRM|1|St|G|592
8BRM|1|St|C|593
8BRM|1|St|G|594
8BRM|1|St|G|595
8BRM|1|St|C|596
8BRM|1|St|G|597
8BRM|1|St|C|598
8BRM|1|St|G|599
8BRM|1|St|C|600
8BRM|1|St|C|601
8BRM|1|St|G|602

Current chains

Chain St

Small Subunit rRNA

Nearby chains

Chain LS

Ribosomal protein L19

Chain SH

Ribosomal protein S7

Chain SM

Ribosomal protein S11