HL_8BTK_032
3D structure
- PDB id
- 8BTK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the TRAP complex with the Sec translocon and a translating ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCAUAAGC
- Length
- 9 nucleotides
- Bulged bases
- 8BTK|1|A2|G|1666
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BTK_032 not in the Motif Atlas
- Homologous match to HL_4V88_220
- Geometric discrepancy: 0.3208
- The information below is about HL_4V88_220
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_01927.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8BTK|1|A2|G|1659
8BTK|1|A2|U|1660
8BTK|1|A2|C|1661
8BTK|1|A2|A|1662
8BTK|1|A2|U|1663
8BTK|1|A2|A|1664
8BTK|1|A2|A|1665
8BTK|1|A2|G|1666
8BTK|1|A2|C|1667
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- uS14
- Chain Ap
- uS9
- Chain Ar
- 40S ribosomal protein S18
- Chain As
- 40S ribosomal protein S19
- Chain At
- 40S ribosomal protein uS10
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