HL_8BTK_129

3D structure

PDB id

8BTK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the TRAP complex with the Sec translocon and a translating ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCGU(PSU)CA(PSU)AGC

Length

11 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BTK|1|B5|G|4162
8BTK|1|B5|C|4163
8BTK|1|B5|G|4164
8BTK|1|B5|U|4165
8BTK|1|B5|PSU|4166
8BTK|1|B5|C|4167
8BTK|1|B5|A|4168
8BTK|1|B5|PSU|4169
8BTK|1|B5|A|4170
8BTK|1|B5|G|4171
8BTK|1|B5|C|4172

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BI

Ribosomal protein L10

Chain Bm

Ubiquitin