HL_8BUU_024

3D structure

PDB id

8BUU (explore in PDB, NAKB, or RNA 3D Hub)

Description

ARE-ABCF VmlR2 bound to a 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGAAAUG

Length

7 nucleotides

Bulged bases

8BUU|1|A|A|828, 8BUU|1|A|U|831

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8BUU_024 not in the Motif Atlas

Homologous match to HL_7RQB_024

Geometric discrepancy: 0.0571

The information below is about HL_7RQB_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74322.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

4

Unit IDs

8BUU|1|A|U|826
8BUU|1|A|G|827
8BUU|1|A|A|828
8BUU|1|A|A|829
8BUU|1|A|A|830
8BUU|1|A|U|831
8BUU|1|A|G|832

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

50S ribosomal protein L2