HL_8BUU_071
3D structure
- PDB id
- 8BUU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- ARE-ABCF VmlR2 bound to a 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGUUCGGUAG
- Length
- 11 nucleotides
- Bulged bases
- 8BUU|1|V|U|16, 8BUU|1|V|G|19, 8BUU|1|V|G|20, 8BUU|1|V|U|21
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BUU_071 not in the Motif Atlas
- Homologous match to HL_3WFS_001
- Geometric discrepancy: 0.1448
- The information below is about HL_3WFS_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8BUU|1|V|C|13
8BUU|1|V|A|14
8BUU|1|V|G|15
8BUU|1|V|U|16
8BUU|1|V|U|17
8BUU|1|V|C|18
8BUU|1|V|G|19
8BUU|1|V|G|20
8BUU|1|V|U|21
8BUU|1|V|A|22
8BUU|1|V|G|23
Current chains
- Chain V
- tRNA-fMet
Nearby chains
- Chain 9
- ExpZ
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: