HL_8BYV_012

3D structure

PDB id

8BYV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.89 Å

Loop

Sequence

GGAAGAACAUAUGUGUAAGUAACUGUGCACAUCUUGACGGUAC

Length

43 nucleotides

Bulged bases

8BYV|1|a|A|456

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8BYV|1|a|G|454
8BYV|1|a|G|455
8BYV|1|a|A|456
8BYV|1|a|A|457
8BYV|1|a|G|458
8BYV|1|a|A|459
8BYV|1|a|A|460
8BYV|1|a|C|461
8BYV|1|a|A|462
8BYV|1|a|U|463
8BYV|1|a|A|464
8BYV|1|a|U|465
8BYV|1|a|G|466
8BYV|1|a|U|467
8BYV|1|a|G|468
8BYV|1|a|U|469
8BYV|1|a|A|470
8BYV|1|a|A|471
8BYV|1|a|G|472
8BYV|1|a|U|473
8BYV|1|a|A|474
8BYV|1|a|A|475
8BYV|1|a|C|476
8BYV|1|a|U|477
8BYV|1|a|G|478
8BYV|1|a|U|479
8BYV|1|a|G|480
8BYV|1|a|C|481
8BYV|1|a|A|482
8BYV|1|a|C|483
8BYV|1|a|A|484
8BYV|1|a|U|485
8BYV|1|a|C|486
8BYV|1|a|U|487
8BYV|1|a|U|488
8BYV|1|a|G|489
8BYV|1|a|A|490
8BYV|1|a|C|491
8BYV|1|a|G|492
8BYV|1|a|G|493
8BYV|1|a|U|494
8BYV|1|a|A|495
8BYV|1|a|C|496

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain p

30S ribosomal protein S16