HL_8BYV_027
3D structure
- PDB id
- 8BYV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Staphylococus aureus 30S-RbfA complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.89 Å
Loop
- Sequence
- UGACAAA
- Length
- 7 nucleotides
- Bulged bases
- 8BYV|1|a|C|1179
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BYV_027 not in the Motif Atlas
- Homologous match to HL_5J7L_026
- Geometric discrepancy: 0.4113
- The information below is about HL_5J7L_026
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_93535.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8BYV|1|a|U|1176
8BYV|1|a|G|1177
8BYV|1|a|A|1178
8BYV|1|a|C|1179
8BYV|1|a|A|1180
8BYV|1|a|A|1181
8BYV|1|a|A|1182
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain b
- 30S ribosomal protein S2
Coloring options: