HL_8C8Y_020
3D structure
- PDB id
- 8C8Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM captures early ribosome assembly in action
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.03 Å
Loop
- Sequence
- CUUAACUGG
- Length
- 9 nucleotides
- Bulged bases
- 8C8Y|1|A|U|646
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8C8Y_020 not in the Motif Atlas
- Geometric match to HL_5J7L_012
- Geometric discrepancy: 0.3293
- The information below is about HL_5J7L_012
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
8C8Y|1|A|C|640
8C8Y|1|A|U|641
8C8Y|1|A|U|642
8C8Y|1|A|A|643
8C8Y|1|A|A|644
8C8Y|1|A|C|645
8C8Y|1|A|U|646
8C8Y|1|A|G|647
8C8Y|1|A|G|648
Current chains
- Chain A
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: