3D structure

PDB id
8C8Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM captures early ribosome assembly in action
Experimental method
ELECTRON MICROSCOPY
Resolution
3.12 Å

Loop

Sequence
CUCG
Length
4 nucleotides
Bulged bases
8C8Z|1|A|U|1729
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8C8Z_037 not in the Motif Atlas
Geometric match to HL_4WF9_037
Geometric discrepancy: 0.3255
The information below is about HL_4WF9_037
Detailed Annotation
Mini UNCG
Broad Annotation
No text annotation
Motif group
HL_48778.2
Basepair signature
cWW-F
Number of instances in this motif group
46

Unit IDs

8C8Z|1|A|C|1728
8C8Z|1|A|U|1729
8C8Z|1|A|C|1730
8C8Z|1|A|G|1731

Current chains

Chain A
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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