HL_8C8Z_042

3D structure

PDB id

8C8Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.12 Å

Loop

Sequence

GACUGGGGCGGUC

Length

13 nucleotides

Bulged bases

8C8Z|1|A|G|2250, 8C8Z|1|A|G|2253, 8C8Z|1|A|C|2254, 8C8Z|1|A|U|2257

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8C8Z|1|A|G|2246
8C8Z|1|A|A|2247
8C8Z|1|A|C|2248
8C8Z|1|A|U|2249
8C8Z|1|A|G|2250
8C8Z|1|A|G|2251
8C8Z|1|A|G|2252
8C8Z|1|A|G|2253
8C8Z|1|A|C|2254
8C8Z|1|A|G|2255
8C8Z|1|A|G|2256
8C8Z|1|A|U|2257
8C8Z|1|A|C|2258

Current chains

Chain A

23S rRNA

Nearby chains