HL_8C90_055

3D structure

PDB id

8C90 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.15 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

8C90|1|A|U|646

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C90_055 not in the Motif Atlas

Homologous match to HL_5J7L_153

Geometric discrepancy: 0.4954

The information below is about HL_5J7L_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13529.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

2

Unit IDs

8C90|1|A|U|641
8C90|1|A|U|642
8C90|1|A|A|643
8C90|1|A|A|644
8C90|1|A|C|645
8C90|1|A|U|646
8C90|1|A|G|647

Current chains

Chain A

23S rRNA

Nearby chains