HL_8C92_022

3D structure

PDB id

8C92 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.79 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

8C92|1|A|U|828

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C92_022 not in the Motif Atlas

Geometric match to HL_6DTD_001

Geometric discrepancy: 0.3688

The information below is about HL_6DTD_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89167.2

Basepair signature

cWW-F-F

Number of instances in this motif group

22

Unit IDs

8C92|1|A|U|826
8C92|1|A|U|827
8C92|1|A|U|828
8C92|1|A|A|829
8C92|1|A|G|830
8C92|1|A|G|831

Current chains

Chain A

23S rRNA

Nearby chains