HL_8C98_021

3D structure

PDB id

8C98 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM captures early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.66 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

8C98|1|A|U|828

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C98_021 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2402

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8C98|1|A|U|826
8C98|1|A|U|827
8C98|1|A|U|828
8C98|1|A|A|829
8C98|1|A|G|830
8C98|1|A|G|831

Current chains

Chain A

23S rRNA

Nearby chains