HL_8C99_008

3D structure

PDB id

8C99 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time limited cryo-EM reveals early ribosome assembly in action

Experimental method

ELECTRON MICROSCOPY

Resolution

3.29 Å

Loop

Sequence

CGGCGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8C99_008 not in the Motif Atlas

Homologous match to HL_4WF9_008

Geometric discrepancy: 0.2033

The information below is about HL_4WF9_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76371.2

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

14

Unit IDs

8C99|1|A|C|246
8C99|1|A|G|247
8C99|1|A|G|248
8C99|1|A|C|249
8C99|1|A|G|250
8C99|1|A|A|251
8C99|1|A|G|252

Current chains

Chain A

23S rRNA

Nearby chains