HL_8CDU_025
3D structure
- PDB id
- 8CDU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rnase R bound to a 30S degradation intermediate (main state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUUGCCAGCAUUCAGUUGGGCACUC
- Length
- 25 nucleotides
- Bulged bases
- 8CDU|1|A|U|1136
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8CDU|1|A|G|1134
8CDU|1|A|U|1135
8CDU|1|A|U|1136
8CDU|1|A|G|1137
8CDU|1|A|C|1138
8CDU|1|A|C|1139
8CDU|1|A|A|1140
8CDU|1|A|G|1141
8CDU|1|A|C|1142
8CDU|1|A|A|1143
8CDU|1|A|U|1144
8CDU|1|A|U|1145
8CDU|1|A|C|1146
8CDU|1|A|A|1147
8CDU|1|A|G|1148
8CDU|1|A|U|1149
8CDU|1|A|U|1150
8CDU|1|A|G|1151
8CDU|1|A|G|1152
8CDU|1|A|G|1153
8CDU|1|A|C|1154
8CDU|1|A|A|1155
8CDU|1|A|C|1156
8CDU|1|A|U|1157
8CDU|1|A|C|1158
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain J
- 30S ribosomal protein S9
- Chain K
- 30S ribosomal protein S10
Coloring options: