HL_8CEP_002

3D structure

PDB id

8CEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Round2 30S head (no antibiotic)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GGAAUGC

Length

7 nucleotides

Bulged bases

8CEP|1|A|G|94

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CEP_002 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.2697

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.1

Basepair signature

cWW-F-F

Number of instances in this motif group

7

Unit IDs

8CEP|1|A|G|75
8CEP|1|A|G|76
8CEP|1|A|A|77
8CEP|1|A|A|78
8CEP|1|A|U|93
8CEP|1|A|G|94
8CEP|1|A|C|95

Current chains

Chain A

16S rRNA

Nearby chains