HL_8CEP_013

3D structure

PDB id

8CEP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Round2 30S head (no antibiotic)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.04 Å

Loop

Sequence

GCAGCC(G7M)C

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CEP_013 not in the Motif Atlas

Homologous match to HL_4LFB_013

Geometric discrepancy: 0.0766

The information below is about HL_4LFB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CEP|1|A|G|521
8CEP|1|A|C|522
8CEP|1|A|A|523
8CEP|1|A|G|524
8CEP|1|A|C|525
8CEP|1|A|C|526
8CEP|1|A|G7M|527
8CEP|1|A|C|528

Current chains

Chain A

16S rRNA

Nearby chains

Chain L

Small ribosomal subunit protein uS12