3D structure

PDB id
8CEU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Retapamulin and Capreomycin bound to the 50S subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
1.83 Å

Loop

Sequence
CAUCCCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_8CEU_025 not in the Motif Atlas
Geometric match to HL_5J7L_151
Geometric discrepancy: 0.3319
The information below is about HL_5J7L_151
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_80922.2
Basepair signature
cWW-tSH-F
Number of instances in this motif group
3

Unit IDs

8CEU|1|a|C|885
8CEU|1|a|A|886
8CEU|1|a|U|887
8CEU|1|a|C|888
8CEU|1|a|C|889
8CEU|1|a|C|890
8CEU|1|a|G|891

Current chains

Chain a
23S rRNA

Nearby chains

No other chains within 10Å

Coloring options:


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