3D structure

PDB id
8CF1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Tetracycline bound to the 30S head
Experimental method
ELECTRON MICROSCOPY
Resolution
1.82 Å

Loop

Sequence
CCUUCGGG
Length
8 nucleotides
Bulged bases
8CF1|1|A|U|1030, 8CF1|1|A|C|1031
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8CF1|1|A|C|1027
8CF1|1|A|C|1028
8CF1|1|A|U|1029
8CF1|1|A|U|1030
8CF1|1|A|C|1031
8CF1|1|A|G|1032
8CF1|1|A|G|1033
8CF1|1|A|G|1034

Current chains

Chain A
16S rRNA

Nearby chains

No other chains within 10Å

Coloring options:

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