HL_8CGK_025

3D structure

PDB id

8CGK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Lincomycin and Avilamycin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.64 Å

Loop

Sequence

GCAAAACC

Length

8 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CGK|1|a|G|875
8CGK|1|a|C|876
8CGK|1|a|A|877
8CGK|1|a|A|878
8CGK|1|a|A|899
8CGK|1|a|A|900
8CGK|1|a|C|901
8CGK|1|a|C|902

Current chains

Chain a

23S rRNA

Nearby chains

Chain l

Large ribosomal subunit protein uL16