HL_8CGN_069

3D structure

PDB id

8CGN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Non-rotated 80S S. cerevisiae ribosome with ligands

Experimental method

ELECTRON MICROSCOPY

Resolution

2.28 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CGN_069 not in the Motif Atlas

Geometric match to HL_4V88_192

Geometric discrepancy: 0.1441

The information below is about HL_4V88_192

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_43793.1

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

8CGN|1|AA|C|3194
8CGN|1|AA|U|3195
8CGN|1|AA|U|3196
8CGN|1|AA|G|3197

Current chains

Chain AA

25S ribosomal RNA

Nearby chains

Chain LL

RPL9A isoform 1

Chain PP

60S ribosomal protein L14-A