HL_8CGR_005
3D structure
- PDB id
- 8CGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Apramycin bound to the 30S body
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.12 Å
Loop
- Sequence
- GGGCC
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CGR_005 not in the Motif Atlas
- Geometric match to HL_5XUZ_001
- Geometric discrepancy: 0.1243
- The information below is about HL_5XUZ_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69752.2
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 7
Unit IDs
8CGR|1|A|G|202
8CGR|1|A|G|203
8CGR|1|A|G|204
8CGR|1|A|C|214
8CGR|1|A|C|215
Current chains
- Chain A
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: