HL_8CGV_021

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

UCUAA

Length

5 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CGV_021 not in the Motif Atlas

Geometric match to HL_4LX6_002

Geometric discrepancy: 0.3289

The information below is about HL_4LX6_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_31585.4

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

20

Unit IDs

8CGV|1|a|U|709
8CGV|1|a|C|719
8CGV|1|a|U|720
8CGV|1|a|A|721
8CGV|1|a|A|722

Current chains

Chain a

23S rRNA

Nearby chains

Chain c

Large ribosomal subunit protein uL2