HL_8CGV_068

3D structure

PDB id

8CGV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Tiamulin bound to the 50S subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.66 Å

Loop

Sequence

CCUCGCG

Length

7 nucleotides

Bulged bases

8CGV|1|a|U|1729, 8CGV|1|a|C|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CGV_068 not in the Motif Atlas

Homologous match to HL_5J7L_214

Geometric discrepancy: 0.3386

The information below is about HL_5J7L_214

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

8CGV|1|a|C|1727
8CGV|1|a|C|1728
8CGV|1|a|U|1729
8CGV|1|a|C|1730
8CGV|1|a|G|1731
8CGV|1|a|C|1732
8CGV|1|a|G|1733

Current chains

Chain a

23S rRNA

Nearby chains