HL_8CRE_026

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CAUGGAAGUCG

Length

11 nucleotides

Bulged bases

8CRE|1|1|A|1241

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8CRE|1|1|C|1235
8CRE|1|1|A|1236
8CRE|1|1|U|1237
8CRE|1|1|G|1238
8CRE|1|1|G|1239
8CRE|1|1|A|1240
8CRE|1|1|A|1241
8CRE|1|1|G|1242
8CRE|1|1|U|1243
8CRE|1|1|C|1244
8CRE|1|1|G|1245

Current chains

Chain 1

25S

Nearby chains

Chain 12

60S ribosomal protein L12-A