HL_8CRE_034

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUAAAAUUC

Length

10 nucleotides

Bulged bases

8CRE|1|1|U|1602, 8CRE|1|1|U|1603

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8CRE|1|1|G|1595
8CRE|1|1|U|1596
8CRE|1|1|U|1597
8CRE|1|1|A|1598
8CRE|1|1|A|1599
8CRE|1|1|A|1600
8CRE|1|1|A|1601
8CRE|1|1|U|1602
8CRE|1|1|U|1603
8CRE|1|1|C|1604

Current chains

Chain 1

25S

Nearby chains

Chain 8

60S ribosomal protein L25

Chain AH

60S ribosomal protein L34-B

Chain AM

60S ribosomal protein L39

Chain z

60S ribosomal protein L19-A