HL_8CRE_054

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UUAAACGAUAACG

Length

13 nucleotides

Bulged bases

8CRE|1|1|A|2609, 8CRE|1|1|C|2616

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

8CRE|1|1|U|2605
8CRE|1|1|U|2606
8CRE|1|1|A|2607
8CRE|1|1|A|2608
8CRE|1|1|A|2609
8CRE|1|1|C|2610
8CRE|1|1|G|2611
8CRE|1|1|A|2612
8CRE|1|1|U|2613
8CRE|1|1|A|2614
8CRE|1|1|A|2615
8CRE|1|1|C|2616
8CRE|1|1|G|2617

Current chains

Chain 1

25S

Nearby chains

Chain 2

60S ribosomal protein L21-A

Chain AC

60S ribosomal protein L29

Chain r

60S ribosomal protein L10