3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GCAUACGAC
Length
9 nucleotides
Bulged bases
8CRE|1|1|C|3269
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_64690.6
Basepair signature
cWW-cSW-F-F-F-F
Number of instances in this motif group
9

Unit IDs

8CRE|1|1|G|3268
8CRE|1|1|C|3269
8CRE|1|1|A|3270
8CRE|1|1|U|3271
8CRE|1|1|A|3272
8CRE|1|1|C|3273
8CRE|1|1|G|3274
8CRE|1|1|A|3275
8CRE|1|1|C|3276

Current chains

Chain 1
25S

Nearby chains

Chain k
60S ribosomal protein L3
Chain x
Ribosomal protein L22

Coloring options:

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