HL_8CRE_158

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUAAUUC

Length

7 nucleotides

Bulged bases

8CRE|1|B|U|157

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8CRE_158 not in the Motif Atlas

Homologous match to HL_8C3A_194

Geometric discrepancy: 0.059

The information below is about HL_8C3A_194

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_37824.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

302

Unit IDs

8CRE|1|B|G|152
8CRE|1|B|U|153
8CRE|1|B|A|154
8CRE|1|B|A|155
8CRE|1|B|U|156
8CRE|1|B|U|157
8CRE|1|B|C|158

Current chains

Chain B

18S

Nearby chains

Chain I

40S ribosomal protein S6

Chain a

40S ribosomal protein S24