HL_8CRE_196

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUGAUUC

Length

8 nucleotides

Bulged bases

8CRE|1|CM|U|247

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8CRE|1|CM|G|241
8CRE|1|CM|A|242
8CRE|1|CM|U|243
8CRE|1|CM|G|244
8CRE|1|CM|A|245
8CRE|1|CM|U|246
8CRE|1|CM|U|247
8CRE|1|CM|C|248

Current chains

Chain CM

18S

Nearby chains

Chain CR

40S ribosomal protein S4

Chain CY

40S ribosomal protein S11A