HL_8CRE_198

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GAUAGUGGC

Length

9 nucleotides

Bulged bases

8CRE|1|CM|G|335

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8CRE|1|CM|G|328
8CRE|1|CM|A|329
8CRE|1|CM|U|330
8CRE|1|CM|A|331
8CRE|1|CM|G|332
8CRE|1|CM|U|333
8CRE|1|CM|G|334
8CRE|1|CM|G|335
8CRE|1|CM|C|336

Current chains

Chain CM

18S

Nearby chains

Chain CV

40S ribosomal protein S8

Chain CY

40S ribosomal protein S11A