HL_8CRE_204

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AAUGUAAAUACCU

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_05304.3

Basepair signature

cWW-cWW-F-F-tSH-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

8CRE|1|CM|A|518
8CRE|1|CM|A|519
8CRE|1|CM|U|520
8CRE|1|CM|G|521
8CRE|1|CM|U|522
8CRE|1|CM|A|523
8CRE|1|CM|A|524
8CRE|1|CM|A|525
8CRE|1|CM|U|526
8CRE|1|CM|A|527
8CRE|1|CM|C|528
8CRE|1|CM|C|529
8CRE|1|CM|U|530

Current chains

Chain CM

18S

Nearby chains

Chain CW

Ribosomal protein S4

Chain DL

40S ribosomal protein S24