HL_8CRE_214

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AGAAAU

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

8CRE|1|CM|A|1069
8CRE|1|CM|G|1070
8CRE|1|CM|A|1071
8CRE|1|CM|A|1072
8CRE|1|CM|A|1073
8CRE|1|CM|U|1074

Current chains

Chain CM

18S

Nearby chains

Chain CP

Ribosomal protein S5

Chain DJ

40S ribosomal protein S22-A

Chain DN

40S ribosomal protein S26