3D structure

PDB id
8CRE (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CGCAAG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
GNRA
Broad Annotation
No text annotation
Motif group
HL_37824.8
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
352

Unit IDs

8CRE|1|CM|C|1106
8CRE|1|CM|G|1107
8CRE|1|CM|C|1108
8CRE|1|CM|A|1109
8CRE|1|CM|A|1110
8CRE|1|CM|G|1111

Current chains

Chain CM
18S

Nearby chains

Chain AS
Large subunit ribosomal RNA; LSU rRNA
Chain CI
60S ribosomal protein L41
Chain CK
60S ribosomal protein L43-A

Coloring options:

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