HL_8CRE_223
3D structure
- PDB id
- 8CRE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUUGUAAUUGUU
- Length
- 12 nucleotides
- Bulged bases
- 8CRE|1|CM|U|1544, 8CRE|1|CM|U|1545, 8CRE|1|CM|G|1546
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_67079.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8CRE|1|CM|A|1537
8CRE|1|CM|U|1538
8CRE|1|CM|U|1539
8CRE|1|CM|G|1540
8CRE|1|CM|U|1541
8CRE|1|CM|A|1542
8CRE|1|CM|A|1543
8CRE|1|CM|U|1544
8CRE|1|CM|U|1545
8CRE|1|CM|G|1546
8CRE|1|CM|U|1547
8CRE|1|CM|U|1548
Current chains
- Chain CM
- 18S
Nearby chains
- Chain CL
- 60S ribosomal protein CAALFM_C304810CA
- Chain DC
- 40S ribosomal protein S15
- Chain DF
- 40S ribosomal protein S18-B
- Chain DG
- 40S ribosomal protein S19-A
- Chain DQ
- 40S ribosomal protein S29A
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