HL_8CSQ_014

3D structure

PDB id

8CSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

AUAAACCCCGAUCAACCU

Length

18 nucleotides

Bulged bases

8CSQ|1|A|A|1220, 8CSQ|1|A|C|1233

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSQ|1|A|A|1218
8CSQ|1|A|U|1219
8CSQ|1|A|A|1220
8CSQ|1|A|A|1221
8CSQ|1|A|A|1222
8CSQ|1|A|C|1223
8CSQ|1|A|C|1224
8CSQ|1|A|C|1225
8CSQ|1|A|C|1226
8CSQ|1|A|G|1227
8CSQ|1|A|A|1228
8CSQ|1|A|U|1229
8CSQ|1|A|C|1230
8CSQ|1|A|A|1231
8CSQ|1|A|A|1232
8CSQ|1|A|C|1233
8CSQ|1|A|C|1234
8CSQ|1|A|U|1235

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 8

Malonyl-CoA-acyl carrier protein transacylase, mitochondrial