HL_8CVJ_137

3D structure

PDB id

8CVJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.4 Å

Loop

Sequence

GCCCACCAGCC

Length

11 nucleotides

Bulged bases

8CVJ|1|2A|C|888

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CVJ|1|2A|G|883
8CVJ|1|2A|C|884
8CVJ|1|2A|C|885
8CVJ|1|2A|C|886
8CVJ|1|2A|A|887
8CVJ|1|2A|C|888
8CVJ|1|2A|C|889
8CVJ|1|2A|A|890
8CVJ|1|2A|G|892
8CVJ|1|2A|C|893
8CVJ|1|2A|C|894

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2m

30S ribosomal protein S13

Chain 2w

Transfer RNA; tRNA