HL_8CVL_199
3D structure
- PDB id
- 8CVL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- GUCUC
- Length
- 5 nucleotides
- Bulged bases
- 8CVL|1|2a|U|839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8CVL_199 not in the Motif Atlas
- Homologous match to HL_6CZR_089
- Geometric discrepancy: 0.3197
- The information below is about HL_6CZR_089
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_48778.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 51
Unit IDs
8CVL|1|2a|G|838
8CVL|1|2a|U|839
8CVL|1|2a|C|840
8CVL|1|2a|U|841
8CVL|1|2a|C|848
Current chains
- Chain 2a
- 16S Ribosomal RNA
Nearby chains
- Chain 2b
- 30S ribosomal protein S2
Coloring options: