HL_8E30_048

3D structure

PDB id

8E30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3142

Experimental method

ELECTRON MICROSCOPY

Resolution

1.91 Å

Loop

Sequence

CG(PSU)AAC(3TD)A(PSU)AACG

Length

13 nucleotides

Bulged bases

8E30|1|I|A|1913, 8E30|1|I|C|1914, 8E30|1|I|A|1918

QA status

Modified nucleotides: PSU, 3TD

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E30|1|I|C|1909
8E30|1|I|G|1910
8E30|1|I|PSU|1911
8E30|1|I|A|1912
8E30|1|I|A|1913
8E30|1|I|C|1914
8E30|1|I|3TD|1915
8E30|1|I|A|1916
8E30|1|I|PSU|1917
8E30|1|I|A|1918
8E30|1|I|A|1919
8E30|1|I|C|1920
8E30|1|I|G|1921

Current chains

Chain I

23S ribosomal RNA

Nearby chains