HL_8E33_025

3D structure

PDB id

8E33 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin analog SAB001

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

GGGGGUCACUUACC

Length

14 nucleotides

Bulged bases

8E33|1|I|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E33|1|I|G|879
8E33|1|I|G|880
8E33|1|I|G|881
8E33|1|I|G|882
8E33|1|I|G|883
8E33|1|I|U|884
8E33|1|I|C|885
8E33|1|I|A|892
8E33|1|I|C|893
8E33|1|I|U|894
8E33|1|I|U|895
8E33|1|I|A|896
8E33|1|I|C|897
8E33|1|I|C|898

Current chains

Chain I

23S ribosomal RNA

Nearby chains