HL_8E33_047

3D structure

PDB id

8E33 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin analog SAB001

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

CG(PSU)AAC(3TD)A(PSU)AACG

Length

13 nucleotides

Bulged bases

8E33|1|I|A|1912, 8E33|1|I|A|1913, 8E33|1|I|C|1914, 8E33|1|I|A|1916

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E33|1|I|C|1909
8E33|1|I|G|1910
8E33|1|I|PSU|1911
8E33|1|I|A|1912
8E33|1|I|A|1913
8E33|1|I|C|1914
8E33|1|I|3TD|1915
8E33|1|I|A|1916
8E33|1|I|PSU|1917
8E33|1|I|A|1918
8E33|1|I|A|1919
8E33|1|I|C|1920
8E33|1|I|G|1921

Current chains

Chain I

23S ribosomal RNA

Nearby chains