HL_8E36_038

3D structure

PDB id

8E36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3146

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

8E36|1|I|A|1535, 8E36|1|I|G|1537

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8E36_038 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2496

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

8E36|1|I|C|1533
8E36|1|I|U|1534
8E36|1|I|A|1535
8E36|1|I|C|1536
8E36|1|I|G|1537
8E36|1|I|G|1538

Current chains

Chain I

23S ribosomal RNA

Nearby chains