HL_8E3L_010

3D structure

PDB id

8E3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to D-linker solithromycin conjugate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GAUAC

Length

5 nucleotides

Bulged bases

8E3L|1|I|U|321, 8E3L|1|I|A|322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8E3L_010 not in the Motif Atlas

Homologous match to HL_7A0S_011

Geometric discrepancy: 0.1769

The information below is about HL_7A0S_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8E3L|1|I|G|319
8E3L|1|I|A|320
8E3L|1|I|U|321
8E3L|1|I|A|322
8E3L|1|I|C|323

Current chains

Chain I

50S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L4