HL_8E3O_051

3D structure

PDB id

8E3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to solithromycin and VM1

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GUGGGAGGCUUUGAAGUGUGGACGCCAGUCUGCAUGGAGCCGACCUUGAAAUACCAC

Length

57 nucleotides

Bulged bases

8E3O|1|I|G|2128, 8E3O|1|I|U|2131, 8E3O|1|I|U|2132, 8E3O|1|I|G|2133, 8E3O|1|I|A|2135, 8E3O|1|I|C|2145, 8E3O|1|I|G|2157, 8E3O|1|I|G|2159, 8E3O|1|I|C|2160, 8E3O|1|I|A|2163

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E3O|1|I|G|2121
8E3O|1|I|U|2122
8E3O|1|I|G|2123
8E3O|1|I|G|2124
8E3O|1|I|G|2125
8E3O|1|I|A|2126
8E3O|1|I|G|2127
8E3O|1|I|G|2128
8E3O|1|I|C|2129
8E3O|1|I|U|2130
8E3O|1|I|U|2131
8E3O|1|I|U|2132
8E3O|1|I|G|2133
8E3O|1|I|A|2134
8E3O|1|I|A|2135
8E3O|1|I|G|2136
8E3O|1|I|U|2137
8E3O|1|I|G|2138
8E3O|1|I|U|2139
8E3O|1|I|G|2140
8E3O|1|I|G|2141
8E3O|1|I|A|2142
8E3O|1|I|C|2143
8E3O|1|I|G|2144
8E3O|1|I|C|2145
8E3O|1|I|C|2146
8E3O|1|I|A|2147
8E3O|1|I|G|2148
8E3O|1|I|U|2149
8E3O|1|I|C|2150
8E3O|1|I|U|2151
8E3O|1|I|G|2152
8E3O|1|I|C|2153
8E3O|1|I|A|2154
8E3O|1|I|U|2155
8E3O|1|I|G|2156
8E3O|1|I|G|2157
8E3O|1|I|A|2158
8E3O|1|I|G|2159
8E3O|1|I|C|2160
8E3O|1|I|C|2161
8E3O|1|I|G|2162
8E3O|1|I|A|2163
8E3O|1|I|C|2164
8E3O|1|I|C|2165
8E3O|1|I|U|2166
8E3O|1|I|U|2167
8E3O|1|I|G|2168
8E3O|1|I|A|2169
8E3O|1|I|A|2170
8E3O|1|I|A|2171
8E3O|1|I|U|2172
8E3O|1|I|A|2173
8E3O|1|I|C|2174
8E3O|1|I|C|2175
8E3O|1|I|A|2176
8E3O|1|I|C|2177

Current chains

Chain I

23S ribosomal RNA

Nearby chains