HL_8E41_028

3D structure

PDB id

8E41 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to tiamulin and VS1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.13 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCAC

Length

50 nucleotides

Bulged bases

8E41|1|I|U|1078, 8E41|1|I|A|1084, 8E41|1|I|A|1095

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E41|1|I|G|1055
8E41|1|I|G|1056
8E41|1|I|A|1057
8E41|1|I|U|1058
8E41|1|I|G|1059
8E41|1|I|U|1060
8E41|1|I|U|1061
8E41|1|I|G|1062
8E41|1|I|G|1063
8E41|1|I|C|1064
8E41|1|I|U|1065
8E41|1|I|U|1066
8E41|1|I|A|1067
8E41|1|I|G|1068
8E41|1|I|A|1069
8E41|1|I|A|1070
8E41|1|I|G|1071
8E41|1|I|C|1072
8E41|1|I|A|1073
8E41|1|I|G|1074
8E41|1|I|C|1075
8E41|1|I|C|1076
8E41|1|I|A|1077
8E41|1|I|U|1078
8E41|1|I|C|1079
8E41|1|I|A|1080
8E41|1|I|U|1081
8E41|1|I|U|1082
8E41|1|I|U|1083
8E41|1|I|A|1084
8E41|1|I|A|1085
8E41|1|I|A|1086
8E41|1|I|G|1087
8E41|1|I|A|1088
8E41|1|I|A|1089
8E41|1|I|A|1090
8E41|1|I|G|1091
8E41|1|I|C|1092
8E41|1|I|G|1093
8E41|1|I|U|1094
8E41|1|I|A|1095
8E41|1|I|A|1096
8E41|1|I|U|1097
8E41|1|I|A|1098
8E41|1|I|G|1099
8E41|1|I|C|1100
8E41|1|I|U|1101
8E41|1|I|C|1102
8E41|1|I|A|1103
8E41|1|I|C|1104

Current chains

Chain I

50S ribosomal RNA

Nearby chains