HL_8E42_074

3D structure

PDB id

8E42 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to tiamulin and azithromycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.29 Å

Loop

Sequence

AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACU

Length

52 nucleotides

Bulged bases

8E42|1|I|U|1061, 8E42|1|I|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E42|1|I|A|1054
8E42|1|I|G|1055
8E42|1|I|G|1056
8E42|1|I|A|1057
8E42|1|I|U|1058
8E42|1|I|G|1059
8E42|1|I|U|1060
8E42|1|I|U|1061
8E42|1|I|G|1062
8E42|1|I|G|1063
8E42|1|I|C|1064
8E42|1|I|U|1065
8E42|1|I|U|1066
8E42|1|I|A|1067
8E42|1|I|G|1068
8E42|1|I|A|1069
8E42|1|I|A|1070
8E42|1|I|G|1071
8E42|1|I|C|1072
8E42|1|I|A|1073
8E42|1|I|G|1074
8E42|1|I|C|1075
8E42|1|I|C|1076
8E42|1|I|A|1077
8E42|1|I|U|1078
8E42|1|I|C|1079
8E42|1|I|A|1080
8E42|1|I|U|1081
8E42|1|I|U|1082
8E42|1|I|U|1083
8E42|1|I|A|1084
8E42|1|I|A|1085
8E42|1|I|A|1086
8E42|1|I|G|1087
8E42|1|I|A|1088
8E42|1|I|A|1089
8E42|1|I|A|1090
8E42|1|I|G|1091
8E42|1|I|C|1092
8E42|1|I|G|1093
8E42|1|I|U|1094
8E42|1|I|A|1095
8E42|1|I|A|1096
8E42|1|I|U|1097
8E42|1|I|A|1098
8E42|1|I|G|1099
8E42|1|I|C|1100
8E42|1|I|U|1101
8E42|1|I|C|1102
8E42|1|I|A|1103
8E42|1|I|C|1104
8E42|1|I|U|1105

Current chains

Chain I

50S ribosomal RNA

Nearby chains