HL_8E43_025

3D structure

PDB id

8E43 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3336

Experimental method

ELECTRON MICROSCOPY

Resolution

2.09 Å

Loop

Sequence

GGGGGUCACUUACC

Length

14 nucleotides

Bulged bases

8E43|1|I|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E43|1|I|G|879
8E43|1|I|G|880
8E43|1|I|G|881
8E43|1|I|G|882
8E43|1|I|G|883
8E43|1|I|U|884
8E43|1|I|C|885
8E43|1|I|A|892
8E43|1|I|C|893
8E43|1|I|U|894
8E43|1|I|U|895
8E43|1|I|A|896
8E43|1|I|C|897
8E43|1|I|C|898

Current chains

Chain I

23S ribosomal RNA

Nearby chains