HL_8E44_025

3D structure

PDB id

8E44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC09

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GCAAGGGGGUCACUUACCAACC

Length

22 nucleotides

Bulged bases

8E44|1|I|C|885

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E44|1|I|G|875
8E44|1|I|C|876
8E44|1|I|A|877
8E44|1|I|A|878
8E44|1|I|G|879
8E44|1|I|G|880
8E44|1|I|G|881
8E44|1|I|G|882
8E44|1|I|G|883
8E44|1|I|U|884
8E44|1|I|C|885
8E44|1|I|A|892
8E44|1|I|C|893
8E44|1|I|U|894
8E44|1|I|U|895
8E44|1|I|A|896
8E44|1|I|C|897
8E44|1|I|C|898
8E44|1|I|A|899
8E44|1|I|A|900
8E44|1|I|C|901
8E44|1|I|C|902

Current chains

Chain I

23S ribosomal RNA

Nearby chains