HL_8E44_028

3D structure

PDB id

8E44 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC09

Experimental method

ELECTRON MICROSCOPY

Resolution

2.53 Å

Loop

Sequence

GCUUAGAAGCAGC

Length

13 nucleotides

Bulged bases

8E44|1|I|A|1070

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E44|1|I|G|1063
8E44|1|I|C|1064
8E44|1|I|U|1065
8E44|1|I|U|1066
8E44|1|I|A|1067
8E44|1|I|G|1068
8E44|1|I|A|1069
8E44|1|I|A|1070
8E44|1|I|G|1071
8E44|1|I|C|1072
8E44|1|I|A|1073
8E44|1|I|G|1074
8E44|1|I|C|1075

Current chains

Chain I

23S ribosomal RNA

Nearby chains